Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.74□□□□□ -0.21
HIST1H3AP68431 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HIST1H3AP68431 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC067863.1-201ENST00000494933 530 ntBASIC13.73□□□□□ -0.21
HIST1H3AP68431 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 SLED1-202ENST00000512051 380 ntBASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 ZNF890P-202ENST00000530367 1156 ntBASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
HIST1H3AP68431 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HIST1H3AP68431 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC084364.1-201ENST00000551967 1556 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC107890.1-201ENST00000422478 521 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC125807.1-201ENST00000483097 614 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC069120.2-201ENST00000524091 540 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AL158211.3-201ENST00000607385 239 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC139530.3-201ENST00000620344 690 ntBASIC13.72□□□□□ -0.21
HIST1H3AP68431 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.72□□□□□ -0.21
HIST1H3AP68431 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HIST1H3AP68431 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms