Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
RPL39P62891 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.17□□□□□ -0.62
RPL39P62891 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
RPL39P62891 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
RPL39P62891 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 AC073439.1-201ENST00000624121 1774 ntBASIC11.16□□□□□ -0.62
RPL39P62891 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
RPL39P62891 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 GPX1P2-201ENST00000429271 606 ntBASIC11.16□□□□□ -0.62
RPL39P62891 RPS2P1-201ENST00000434010 821 ntBASIC11.16□□□□□ -0.62
RPL39P62891 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC11.16□□□□□ -0.62
RPL39P62891 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 KRT18P31-201ENST00000506277 1292 ntBASIC11.16□□□□□ -0.62
RPL39P62891 CFL1-202ENST00000524553 860 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
RPL39P62891 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 OR7E14P-202ENST00000530490 1290 ntBASIC11.16□□□□□ -0.62
RPL39P62891 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.16□□□□□ -0.62
RPL39P62891 AL031432.2-201ENST00000566714 459 ntBASIC11.16□□□□□ -0.62
RPL39P62891 AL928711.1-201ENST00000570165 459 ntBASIC11.16□□□□□ -0.62
RPL39P62891 MIR4313-201ENST00000580760 101 ntBASIC11.16□□□□□ -0.62
RPL39P62891 AC004790.2-201ENST00000623588 572 ntBASIC11.16□□□□□ -0.62
RPL39P62891 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 AC126335.2-201ENST00000623362 4637 ntBASIC11.16□□□□□ -0.62
RPL39P62891 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC11.16□□□□□ -0.62
RPL39P62891 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.16□□□□□ -0.62
RPL39P62891 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
RPL39P62891 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RPL39P62891 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.15□□□□□ -0.62
RPL39P62891 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RPL39P62891 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RPL39P62891 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms