Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCR4P61073 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 ACE3P-201ENST00000423435 1973 ntBASIC14.35□□□□□ -0.11
CXCR4P61073 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CXCR4P61073 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCR4P61073 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 EMBP1-201ENST00000458200 901 ntBASIC14.35□□□□□ -0.11
CXCR4P61073 KRT18P34-201ENST00000488218 1270 ntBASIC14.35□□□□□ -0.11
CXCR4P61073 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCR4P61073 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.35□□□□□ -0.11
CXCR4P61073 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 AC148477.8-201ENST00000624298 468 ntBASIC14.35□□□□□ -0.11
CXCR4P61073 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.35□□□□□ -0.11
CXCR4P61073 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CXCR4P61073 AL359881.3-201ENST00000602640 1721 ntBASIC14.35□□□□□ -0.11
CXCR4P61073 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.35□□□□□ -0.11
CXCR4P61073 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.34□□□□□ -0.11
CXCR4P61073 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 RPL5P21-201ENST00000404620 815 ntBASIC14.34□□□□□ -0.11
CXCR4P61073 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.34□□□□□ -0.11
CXCR4P61073 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CXCR4P61073 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.34□□□□□ -0.11
CXCR4P61073 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CXCR4P61073 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.34□□□□□ -0.11
CXCR4P61073 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CXCR4P61073 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCR4P61073 AC010327.5-201ENST00000586923 3061 ntBASIC14.33□□□□□ -0.11
CXCR4P61073 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.33□□□□□ -0.11
CXCR4P61073 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.33□□□□□ -0.11
CXCR4P61073 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CXCR4P61073 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.33□□□□□ -0.11
CXCR4P61073 AL691432.1-201ENST00000596308 1422 ntBASIC14.33□□□□□ -0.11
CXCR4P61073 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CXCR4P61073 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCR4P61073 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms