Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
APOC4P55056 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
APOC4P55056 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.5□□□□□ -0.57
APOC4P55056 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.5□□□□□ -0.57
APOC4P55056 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.5□□□□□ -0.57
APOC4P55056 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 AC015936.2-201ENST00000593177 259 ntBASIC11.5□□□□□ -0.57
APOC4P55056 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.5□□□□□ -0.57
APOC4P55056 AC097359.3-201ENST00000603982 1210 ntBASIC11.5□□□□□ -0.57
APOC4P55056 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 KRT8P22-201ENST00000562317 1415 ntBASIC11.5□□□□□ -0.57
APOC4P55056 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
APOC4P55056 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
APOC4P55056 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.5□□□□□ -0.57
APOC4P55056 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.5□□□□□ -0.57
APOC4P55056 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 INTS4P2-202ENST00000614726 2019 ntBASIC11.49□□□□□ -0.57
APOC4P55056 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
APOC4P55056 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.49□□□□□ -0.57
APOC4P55056 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 LINC02447-202ENST00000501888 2146 ntBASIC11.49□□□□□ -0.57
APOC4P55056 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC4P55056 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC4P55056 ENPP7P5-201ENST00000541031 1031 ntBASIC11.49□□□□□ -0.57
APOC4P55056 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 CTBP2P3-201ENST00000585629 1255 ntBASIC11.49□□□□□ -0.57
APOC4P55056 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 AL049840.4-201ENST00000602422 811 ntBASIC11.49□□□□□ -0.57
APOC4P55056 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC4P55056 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.49□□□□□ -0.57
APOC4P55056 WFDC1-204ENST00000613603 549 ntBASIC11.49□□□□□ -0.57
APOC4P55056 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 AC124067.4-201ENST00000519691 2379 ntBASIC11.49□□□□□ -0.57
APOC4P55056 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
APOC4P55056 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.49□□□□□ -0.57
APOC4P55056 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.49□□□□□ -0.57
APOC4P55056 AL121723.1-201ENST00000445194 1519 ntBASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms