Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
LIMK2P53671 KRT8P37-201ENST00000451609 1420 ntBASIC15.85■□□□□ 0.13
LIMK2P53671 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK2P53671 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK2P53671 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LIMK2P53671 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK2P53671 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LIMK2P53671 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK2P53671 AC015922.1-201ENST00000421102 1152 ntBASIC15.85■□□□□ 0.13
LIMK2P53671 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.85■□□□□ 0.13
LIMK2P53671 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.85■□□□□ 0.13
LIMK2P53671 AL139010.1-201ENST00000454878 894 ntBASIC15.85■□□□□ 0.13
LIMK2P53671 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.85■□□□□ 0.13
LIMK2P53671 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.85■□□□□ 0.13
LIMK2P53671 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 AL590560.3-201ENST00000623350 461 ntBASIC15.85■□□□□ 0.13
LIMK2P53671 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LIMK2P53671 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
LIMK2P53671 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.85■□□□□ 0.13
LIMK2P53671 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LIMK2P53671 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.85■□□□□ 0.13
LIMK2P53671 AC100757.3-201ENST00000622361 1406 ntBASIC15.85■□□□□ 0.13
LIMK2P53671 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 AC091951.1-201ENST00000512854 2465 ntBASIC15.84■□□□□ 0.13
LIMK2P53671 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
LIMK2P53671 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.84■□□□□ 0.13
LIMK2P53671 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.84■□□□□ 0.13
LIMK2P53671 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
LIMK2P53671 AF228730.6-201ENST00000641497 218 ntBASIC15.84■□□□□ 0.13
LIMK2P53671 AC084121.3-201ENST00000641716 218 ntBASIC15.84■□□□□ 0.13
LIMK2P53671 AC105233.6-201ENST00000642093 218 ntBASIC15.84■□□□□ 0.13
LIMK2P53671 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.84■□□□□ 0.13
LIMK2P53671 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LIMK2P53671 AC126365.1-201ENST00000578585 1514 ntBASIC15.84■□□□□ 0.13
LIMK2P53671 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LIMK2P53671 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LIMK2P53671 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.83■□□□□ 0.13
LIMK2P53671 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LIMK2P53671 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LIMK2P53671 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.83■□□□□ 0.12
LIMK2P53671 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.83■□□□□ 0.12
LIMK2P53671 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK2P53671 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK2P53671 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK2P53671 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK2P53671 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LIMK2P53671 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms