Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.67□□□□□ -0.06
RNF144AP50876 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF144AP50876 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 RN7SL828P-201ENST00000607615 303 ntBASIC14.67□□□□□ -0.06
RNF144AP50876 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
RNF144AP50876 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.66□□□□□ -0.06
RNF144AP50876 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 AC023157.3-201ENST00000619086 2088 ntBASIC14.66□□□□□ -0.06
RNF144AP50876 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF144AP50876 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF144AP50876 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF144AP50876 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF144AP50876 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.66□□□□□ -0.06
RNF144AP50876 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.66□□□□□ -0.06
RNF144AP50876 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RNF144AP50876 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.66□□□□□ -0.06
RNF144AP50876 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 METTL21AP1-201ENST00000438852 635 ntBASIC14.65□□□□□ -0.06
RNF144AP50876 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF144AP50876 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.65□□□□□ -0.06
RNF144AP50876 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF144AP50876 AC026979.3-201ENST00000607315 403 ntBASIC14.65□□□□□ -0.06
RNF144AP50876 AL133215.2-201ENST00000609242 977 ntBASIC14.65□□□□□ -0.06
RNF144AP50876 AP001059.3-201ENST00000619053 235 ntBASIC14.65□□□□□ -0.06
RNF144AP50876 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RNF144AP50876 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF144AP50876 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF144AP50876 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF144AP50876 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms