Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 AP001282.1-201ENST00000531301 1499 ntBASIC14.43□□□□□ -0.1
RFC3P40938 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.42□□□□□ -0.1
RFC3P40938 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.42□□□□□ -0.1
RFC3P40938 AC099568.2-201ENST00000609194 695 ntBASIC14.42□□□□□ -0.1
RFC3P40938 WFDC1-204ENST00000613603 549 ntBASIC14.42□□□□□ -0.1
RFC3P40938 AL158212.4-201ENST00000624062 1286 ntBASIC14.42□□□□□ -0.1
RFC3P40938 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFC3P40938 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.42□□□□□ -0.1
RFC3P40938 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFC3P40938 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
RFC3P40938 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RFC3P40938 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.41□□□□□ -0.1
RFC3P40938 TMEM14DP-201ENST00000422205 345 ntBASIC14.41□□□□□ -0.1
RFC3P40938 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.41□□□□□ -0.1
RFC3P40938 RPL13P2-201ENST00000440687 659 ntBASIC14.41□□□□□ -0.1
RFC3P40938 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.41□□□□□ -0.1
RFC3P40938 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 AC104596.2-201ENST00000512793 793 ntBASIC14.41□□□□□ -0.1
RFC3P40938 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.41□□□□□ -0.1
RFC3P40938 RARRES2P5-201ENST00000564013 466 ntBASIC14.41□□□□□ -0.1
RFC3P40938 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.41□□□□□ -0.1
RFC3P40938 AL450472.2-201ENST00000603663 1156 ntBASIC14.41□□□□□ -0.1
RFC3P40938 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms