Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 BTBD7P1-201ENST00000447253 1453 ntBASIC12.87□□□□□ -0.35
CEACAM3P40198 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AC092580.3-201ENST00000430932 139 ntBASIC12.87□□□□□ -0.35
CEACAM3P40198 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.87□□□□□ -0.35
CEACAM3P40198 ZNF890P-202ENST00000530367 1156 ntBASIC12.87□□□□□ -0.35
CEACAM3P40198 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.87□□□□□ -0.35
CEACAM3P40198 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CEACAM3P40198 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CEACAM3P40198 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.86□□□□□ -0.35
CEACAM3P40198 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.86□□□□□ -0.35
CEACAM3P40198 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CEACAM3P40198 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 AP005117.1-202ENST00000581724 1908 ntBASIC12.86□□□□□ -0.35
CEACAM3P40198 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CEACAM3P40198 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 MIR770-201ENST00000390219 98 ntBASIC12.86□□□□□ -0.35
CEACAM3P40198 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.86□□□□□ -0.35
CEACAM3P40198 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.86□□□□□ -0.35
CEACAM3P40198 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.86□□□□□ -0.35
CEACAM3P40198 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.86□□□□□ -0.35
CEACAM3P40198 AC011467.4-201ENST00000594891 528 ntBASIC12.86□□□□□ -0.35
CEACAM3P40198 AC074044.1-201ENST00000609673 707 ntBASIC12.86□□□□□ -0.35
CEACAM3P40198 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.86□□□□□ -0.35
CEACAM3P40198 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.86□□□□□ -0.35
CEACAM3P40198 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CEACAM3P40198 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CEACAM3P40198 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CEACAM3P40198 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CEACAM3P40198 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CEACAM3P40198 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CEACAM3P40198 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CEACAM3P40198 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.85□□□□□ -0.35
CEACAM3P40198 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms