Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RFC1P35251 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
RFC1P35251 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFC1P35251 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFC1P35251 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC1P35251 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RFC1P35251 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.58■□□□□ 0.25
RFC1P35251 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC1P35251 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC1P35251 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
RFC1P35251 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFC1P35251 AC067930.6-201ENST00000623257 4947 ntBASIC16.58■□□□□ 0.24
RFC1P35251 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 AC107890.1-201ENST00000422478 521 ntBASIC16.58■□□□□ 0.24
RFC1P35251 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 METTL21AP1-201ENST00000438852 635 ntBASIC16.58■□□□□ 0.24
RFC1P35251 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.58■□□□□ 0.24
RFC1P35251 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 AC140878.1-201ENST00000565277 250 ntBASIC16.58■□□□□ 0.24
RFC1P35251 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.58■□□□□ 0.24
RFC1P35251 GPALPP1-207ENST00000611650 899 ntBASIC16.58■□□□□ 0.24
RFC1P35251 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RFC1P35251 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RFC1P35251 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.58■□□□□ 0.24
RFC1P35251 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFC1P35251 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFC1P35251 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.57■□□□□ 0.24
RFC1P35251 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC1P35251 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFC1P35251 AC074338.1-201ENST00000416825 156 ntBASIC16.57■□□□□ 0.24
RFC1P35251 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 AC069120.2-201ENST00000524091 540 ntBASIC16.57■□□□□ 0.24
RFC1P35251 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC1P35251 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC1P35251 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFC1P35251 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC1P35251 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.57■□□□□ 0.24
RFC1P35251 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 AC073592.8-201ENST00000624126 511 ntBASIC16.57■□□□□ 0.24
RFC1P35251 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFC1P35251 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFC1P35251 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RFC1P35251 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 DBET-201ENST00000630918 3363 ntBASIC16.57■□□□□ 0.24
RFC1P35251 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RFC1P35251 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RFC1P35251 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC1P35251 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFC1P35251 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC1P35251 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms