Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.02■□□□□ 0.8
RXRBP28702 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RXRBP28702 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
RXRBP28702 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.02■□□□□ 0.8
RXRBP28702 AC010141.1-201ENST00000411585 623 ntBASIC20.02■□□□□ 0.8
RXRBP28702 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC20.02■□□□□ 0.8
RXRBP28702 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RXRBP28702 DUTP3-201ENST00000450025 415 ntBASIC20.02■□□□□ 0.8
RXRBP28702 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.02■□□□□ 0.8
RXRBP28702 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.02■□□□□ 0.8
RXRBP28702 AC005041.3-201ENST00000606287 649 ntBASIC20.02■□□□□ 0.8
RXRBP28702 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.02■□□□□ 0.8
RXRBP28702 TP53-221ENST00000615910 1149 ntTSL 5 BASIC20.02■□□□□ 0.8
RXRBP28702 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.02■□□□□ 0.8
RXRBP28702 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
RXRBP28702 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RXRBP28702 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RXRBP28702 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RXRBP28702 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RXRBP28702 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
RXRBP28702 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.02■□□□□ 0.79
RXRBP28702 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RXRBP28702 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRBP28702 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.01■□□□□ 0.79
RXRBP28702 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRBP28702 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 ORAOV1P1-201ENST00000503108 395 ntBASIC20.01■□□□□ 0.79
RXRBP28702 EMC4-208ENST00000559078 599 ntTSL 3 BASIC20.01■□□□□ 0.79
RXRBP28702 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 AC004466.1-201ENST00000599515 1080 ntBASIC20.01■□□□□ 0.79
RXRBP28702 AL157813.1-201ENST00000612996 587 ntBASIC20.01■□□□□ 0.79
RXRBP28702 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRBP28702 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 AC018892.3-201ENST00000623986 2499 ntBASIC20.01■□□□□ 0.79
RXRBP28702 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RXRBP28702 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.01■□□□□ 0.79
RXRBP28702 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.01■□□□□ 0.79
RXRBP28702 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RXRBP28702 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RXRBP28702 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20■□□□□ 0.79
RXRBP28702 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RXRBP28702 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20■□□□□ 0.79
RXRBP28702 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20■□□□□ 0.79
RXRBP28702 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RXRBP28702 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RXRBP28702 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC20■□□□□ 0.79
RXRBP28702 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20■□□□□ 0.79
RXRBP28702 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC20■□□□□ 0.79
RXRBP28702 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC20■□□□□ 0.79
RXRBP28702 AL135901.1-201ENST00000451812 333 ntBASIC20■□□□□ 0.79
RXRBP28702 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC20■□□□□ 0.79
RXRBP28702 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RXRBP28702 AC007326.1-201ENST00000604539 458 ntBASIC20■□□□□ 0.79
RXRBP28702 AC012073.1-201ENST00000606114 1108 ntBASIC20■□□□□ 0.79
RXRBP28702 AC009560.1-201ENST00000620208 434 ntBASIC20■□□□□ 0.79
RXRBP28702 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20■□□□□ 0.79
RXRBP28702 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20■□□□□ 0.79
RXRBP28702 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20■□□□□ 0.79
RXRBP28702 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RXRBP28702 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 AC015909.3-201ENST00000572855 1794 ntBASIC20■□□□□ 0.79
RXRBP28702 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RXRBP28702 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RXRBP28702 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms