Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
COL8A2P25067 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.27□□□□□ -0.29
COL8A2P25067 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.27□□□□□ -0.29
COL8A2P25067 FAM86LP-201ENST00000478302 853 ntBASIC13.27□□□□□ -0.29
COL8A2P25067 SLED1-202ENST00000512051 380 ntBASIC13.27□□□□□ -0.29
COL8A2P25067 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.27□□□□□ -0.29
COL8A2P25067 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 AC036164.1-201ENST00000570544 333 ntBASIC13.27□□□□□ -0.29
COL8A2P25067 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.27□□□□□ -0.29
COL8A2P25067 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
COL8A2P25067 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.27□□□□□ -0.29
COL8A2P25067 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 AL513523.2-202ENST00000427283 2040 ntBASIC13.27□□□□□ -0.29
COL8A2P25067 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
COL8A2P25067 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.27□□□□□ -0.29
COL8A2P25067 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 OR8S1-201ENST00000310194 1080 ntBASIC13.26□□□□□ -0.29
COL8A2P25067 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
COL8A2P25067 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 U91328.1-201ENST00000437528 223 ntBASIC13.26□□□□□ -0.29
COL8A2P25067 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.26□□□□□ -0.29
COL8A2P25067 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 AC069224.1-201ENST00000566372 1715 ntBASIC13.26□□□□□ -0.29
COL8A2P25067 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
COL8A2P25067 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.26□□□□□ -0.29
COL8A2P25067 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.26□□□□□ -0.29
COL8A2P25067 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.26□□□□□ -0.29
COL8A2P25067 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.26□□□□□ -0.29
COL8A2P25067 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
COL8A2P25067 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms