Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.83■□□□□ 0.6
LMNB1P20700 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 AC106794.1-201ENST00000506935 792 ntBASIC18.83■□□□□ 0.6
LMNB1P20700 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.83■□□□□ 0.6
LMNB1P20700 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.83■□□□□ 0.6
LMNB1P20700 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LMNB1P20700 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
LMNB1P20700 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 AC022211.2-201ENST00000585075 2527 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.82■□□□□ 0.6
LMNB1P20700 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.82■□□□□ 0.6
LMNB1P20700 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.82■□□□□ 0.6
LMNB1P20700 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.82■□□□□ 0.6
LMNB1P20700 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC18.82■□□□□ 0.6
LMNB1P20700 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 NPM1P43-201ENST00000558669 786 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC18.82■□□□□ 0.6
LMNB1P20700 AC073413.1-201ENST00000603927 732 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 AL353770.1-201ENST00000614915 403 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.82■□□□□ 0.6
LMNB1P20700 AL805961.1-203ENST00000641078 1258 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 LRRC59-203ENST00000576448 1531 ntBASIC18.82■□□□□ 0.6
LMNB1P20700 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.82■□□□□ 0.6
LMNB1P20700 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LMNB1P20700 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LMNB1P20700 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
LMNB1P20700 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LMNB1P20700 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.81■□□□□ 0.6
LMNB1P20700 AC006335.1-201ENST00000445200 547 ntBASIC18.81■□□□□ 0.6
LMNB1P20700 HIST2H2BB-201ENST00000449108 381 ntBASIC18.81■□□□□ 0.6
LMNB1P20700 NOC2LP1-201ENST00000450578 752 ntBASIC18.81■□□□□ 0.6
LMNB1P20700 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 AC019193.1-201ENST00000506678 823 ntBASIC18.81■□□□□ 0.6
LMNB1P20700 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.81■□□□□ 0.6
LMNB1P20700 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.81■□□□□ 0.6
LMNB1P20700 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.81■□□□□ 0.6
LMNB1P20700 PRSS30P-206ENST00000641773 873 ntBASIC18.81■□□□□ 0.6
LMNB1P20700 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.81■□□□□ 0.6
LMNB1P20700 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.81■□□□□ 0.6
LMNB1P20700 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LMNB1P20700 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LMNB1P20700 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMNB1P20700 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms