Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DPA1P20036 AC136621.1-201ENST00000624017 2304 ntBASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 TSSK5P-201ENST00000423978 907 ntBASIC15.86■□□□□ 0.13
HLA-DPA1P20036 RPL13P2-201ENST00000440687 659 ntBASIC15.86■□□□□ 0.13
HLA-DPA1P20036 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AL355385.1-201ENST00000606123 409 ntBASIC15.86■□□□□ 0.13
HLA-DPA1P20036 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DPA1P20036 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AL390754.1-201ENST00000619088 582 ntBASIC15.85■□□□□ 0.13
HLA-DPA1P20036 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AL109936.8-201ENST00000641772 604 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms