Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
VCLP18206 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.86■□□□□ 0.13
VCLP18206 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VCLP18206 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.86■□□□□ 0.13
VCLP18206 SERBP1P3-201ENST00000459980 809 ntBASIC15.86■□□□□ 0.13
VCLP18206 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 AC097493.3-201ENST00000509725 367 ntBASIC15.86■□□□□ 0.13
VCLP18206 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.86■□□□□ 0.13
VCLP18206 AC243562.2-201ENST00000561247 970 ntBASIC15.86■□□□□ 0.13
VCLP18206 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.86■□□□□ 0.13
VCLP18206 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VCLP18206 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.86■□□□□ 0.13
VCLP18206 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.86■□□□□ 0.13
VCLP18206 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
VCLP18206 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.86■□□□□ 0.13
VCLP18206 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VCLP18206 CICP4-201ENST00000447359 2812 ntBASIC15.86■□□□□ 0.13
VCLP18206 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.85■□□□□ 0.13
VCLP18206 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.85■□□□□ 0.13
VCLP18206 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.85■□□□□ 0.13
VCLP18206 AC241585.1-201ENST00000433527 519 ntBASIC15.85■□□□□ 0.13
VCLP18206 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.85■□□□□ 0.13
VCLP18206 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.85■□□□□ 0.13
VCLP18206 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.85■□□□□ 0.13
VCLP18206 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.85■□□□□ 0.13
VCLP18206 SPDYE12P-201ENST00000618416 771 ntBASIC15.85■□□□□ 0.13
VCLP18206 AL390754.1-201ENST00000619088 582 ntBASIC15.85■□□□□ 0.13
VCLP18206 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.85■□□□□ 0.13
VCLP18206 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.85■□□□□ 0.13
VCLP18206 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.85■□□□□ 0.13
VCLP18206 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 AC104581.4-201ENST00000623126 3052 ntBASIC15.85■□□□□ 0.13
VCLP18206 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.85■□□□□ 0.13
VCLP18206 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VCLP18206 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 AC026748.1-201ENST00000624349 3251 ntBASIC15.84■□□□□ 0.13
VCLP18206 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VCLP18206 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 INGX-202ENST00000489074 768 ntBASIC15.84■□□□□ 0.13
VCLP18206 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VCLP18206 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.84■□□□□ 0.13
VCLP18206 AL079307.3-201ENST00000556114 283 ntBASIC15.84■□□□□ 0.13
VCLP18206 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 AC005498.2-205ENST00000593218 784 ntBASIC15.84■□□□□ 0.13
VCLP18206 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.84■□□□□ 0.13
VCLP18206 AL138828.2-201ENST00000615812 383 ntBASIC15.84■□□□□ 0.13
VCLP18206 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.84■□□□□ 0.13
VCLP18206 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
VCLP18206 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
VCLP18206 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms