Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.62■□□□□ 0.25
CCDC130P13994 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC130P13994 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC130P13994 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC130P13994 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 AC087499.6-201ENST00000411576 835 ntBASIC16.61■□□□□ 0.25
CCDC130P13994 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC130P13994 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 KRT18P43-201ENST00000469825 1281 ntBASIC16.61■□□□□ 0.25
CCDC130P13994 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC130P13994 TP53TG3HP-202ENST00000569755 579 ntBASIC16.61■□□□□ 0.25
CCDC130P13994 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 AC099568.2-201ENST00000609194 695 ntBASIC16.61■□□□□ 0.25
CCDC130P13994 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC130P13994 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC130P13994 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC130P13994 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC130P13994 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC130P13994 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC130P13994 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC130P13994 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
CCDC130P13994 MYCLP2-201ENST00000449268 967 ntBASIC16.6■□□□□ 0.25
CCDC130P13994 RN7SL399P-201ENST00000471648 279 ntBASIC16.6■□□□□ 0.25
CCDC130P13994 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC130P13994 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 AC093726.1-201ENST00000608064 963 ntBASIC16.6■□□□□ 0.25
CCDC130P13994 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC130P13994 AC025048.6-201ENST00000634326 1161 ntBASIC16.6■□□□□ 0.25
CCDC130P13994 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 LINC00554-201ENST00000564841 3011 ntBASIC16.6■□□□□ 0.25
CCDC130P13994 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC130P13994 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC130P13994 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CCDC130P13994 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC130P13994 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC130P13994 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC130P13994 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC130P13994 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC130P13994 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC130P13994 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC130P13994 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC130P13994 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC130P13994 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC130P13994 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC130P13994 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms