Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC26.12■■□□□ 1.77
CFTRP13569 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 AC130709.1-201ENST00000484779 1212 ntBASIC26.12■■□□□ 1.77
CFTRP13569 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC26.12■■□□□ 1.77
CFTRP13569 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC26.12■■□□□ 1.77
CFTRP13569 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC26.12■■□□□ 1.77
CFTRP13569 AC007718.1-201ENST00000621078 280 ntBASIC26.12■■□□□ 1.77
CFTRP13569 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC26.12■■□□□ 1.77
CFTRP13569 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
CFTRP13569 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CFTRP13569 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CFTRP13569 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CFTRP13569 AC234644.1-201ENST00000406065 370 ntBASIC26.11■■□□□ 1.77
CFTRP13569 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 AC026803.1-201ENST00000569130 274 ntBASIC26.11■■□□□ 1.77
CFTRP13569 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC26.11■■□□□ 1.77
CFTRP13569 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC26.11■■□□□ 1.77
CFTRP13569 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC26.11■■□□□ 1.77
CFTRP13569 RPL35-206ENST00000629845 340 ntTSL 5 BASIC26.11■■□□□ 1.77
CFTRP13569 AMT-239ENST00000636865 1914 ntTSL 5 BASIC26.11■■□□□ 1.77
CFTRP13569 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 AGGF1P2-201ENST00000426656 2106 ntBASIC26.11■■□□□ 1.77
CFTRP13569 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 KRT8P21-201ENST00000430398 1491 ntBASIC26.11■■□□□ 1.77
CFTRP13569 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC26.11■■□□□ 1.77
CFTRP13569 NAGK-204ENST00000443872 878 ntTSL 3 BASIC26.11■■□□□ 1.77
CFTRP13569 AL031713.1-201ENST00000564813 661 ntBASIC26.11■■□□□ 1.77
CFTRP13569 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC26.11■■□□□ 1.77
CFTRP13569 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC26.1■■□□□ 1.77
CFTRP13569 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC26.1■■□□□ 1.77
CFTRP13569 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
CFTRP13569 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC26.1■■□□□ 1.77
CFTRP13569 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
CFTRP13569 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC26.1■■□□□ 1.77
CFTRP13569 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 AP002803.1-201ENST00000528836 498 ntBASIC26.1■■□□□ 1.77
CFTRP13569 AC141586.1-203ENST00000567242 366 ntBASIC26.1■■□□□ 1.77
CFTRP13569 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC26.1■■□□□ 1.77
CFTRP13569 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CFTRP13569 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC26.09■■□□□ 1.77
CFTRP13569 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC26.09■■□□□ 1.77
CFTRP13569 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC26.09■■□□□ 1.77
CFTRP13569 RPS9P1-201ENST00000419943 583 ntBASIC26.09■■□□□ 1.77
CFTRP13569 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CFTRP13569 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
CFTRP13569 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC26.09■■□□□ 1.77
CFTRP13569 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC26.09■■□□□ 1.77
CFTRP13569 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC26.09■■□□□ 1.77
CFTRP13569 AC005357.2-202ENST00000590507 1060 ntBASIC26.09■■□□□ 1.77
CFTRP13569 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC26.09■■□□□ 1.77
CFTRP13569 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC26.09■■□□□ 1.77
CFTRP13569 AL109837.1-201ENST00000603272 613 ntBASIC26.09■■□□□ 1.77
CFTRP13569 AC103810.10-201ENST00000606504 343 ntBASIC26.09■■□□□ 1.77
CFTRP13569 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC26.09■■□□□ 1.77
CFTRP13569 CYP51A1P3-201ENST00000400072 1428 ntBASIC26.09■■□□□ 1.77
CFTRP13569 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CFTRP13569 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CFTRP13569 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFTRP13569 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC26.08■■□□□ 1.77
CFTRP13569 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CFTRP13569 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CFTRP13569 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC26.08■■□□□ 1.77
CFTRP13569 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CFTRP13569 AL627231.1-201ENST00000394467 1125 ntBASIC26.08■■□□□ 1.77
CFTRP13569 AC012441.2-201ENST00000444843 739 ntBASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms