Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 ACE3P-201ENST00000423435 1973 ntBASIC15.18■□□□□ 0.02
COX4I1P13073 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.18■□□□□ 0.02
COX4I1P13073 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
COX4I1P13073 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
COX4I1P13073 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.17■□□□□ 0.02
COX4I1P13073 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 AC012640.2-201ENST00000561606 901 ntBASIC15.17■□□□□ 0.02
COX4I1P13073 MIR4751-201ENST00000578027 74 ntBASIC15.17■□□□□ 0.02
COX4I1P13073 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.17■□□□□ 0.02
COX4I1P13073 AL450472.2-201ENST00000603663 1156 ntBASIC15.17■□□□□ 0.02
COX4I1P13073 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.17■□□□□ 0.02
COX4I1P13073 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.17■□□□□ 0.02
COX4I1P13073 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
COX4I1P13073 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
COX4I1P13073 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.16■□□□□ 0.02
COX4I1P13073 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
COX4I1P13073 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COX4I1P13073 AC004987.2-201ENST00000395959 1148 ntBASIC15.16■□□□□ 0.02
COX4I1P13073 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 RNPS1P1-201ENST00000507437 918 ntBASIC15.16■□□□□ 0.02
COX4I1P13073 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.16■□□□□ 0.02
COX4I1P13073 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 AC061975.2-201ENST00000581722 295 ntBASIC15.16■□□□□ 0.02
COX4I1P13073 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.16■□□□□ 0.02
COX4I1P13073 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.16■□□□□ 0.02
COX4I1P13073 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.16■□□□□ 0.02
COX4I1P13073 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COX4I1P13073 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms