Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.51□□□□□ -0.09
BMP4P12644 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.51□□□□□ -0.09
BMP4P12644 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
BMP4P12644 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
BMP4P12644 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
BMP4P12644 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BMP4P12644 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.51□□□□□ -0.09
BMP4P12644 CICP20-201ENST00000443330 2801 ntBASIC14.51□□□□□ -0.09
BMP4P12644 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 AC009090.5-201ENST00000624886 2285 ntBASIC14.5□□□□□ -0.09
BMP4P12644 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.5□□□□□ -0.09
BMP4P12644 KRT8P49-201ENST00000604166 1432 ntBASIC14.5□□□□□ -0.09
BMP4P12644 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 AL359183.1-201ENST00000623796 2132 ntBASIC14.5□□□□□ -0.09
BMP4P12644 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
BMP4P12644 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.5□□□□□ -0.09
BMP4P12644 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.5□□□□□ -0.09
BMP4P12644 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.5□□□□□ -0.09
BMP4P12644 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.5□□□□□ -0.09
BMP4P12644 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.5□□□□□ -0.09
BMP4P12644 AP002472.1-201ENST00000577490 586 ntBASIC14.5□□□□□ -0.09
BMP4P12644 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
BMP4P12644 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
BMP4P12644 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
BMP4P12644 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
BMP4P12644 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BMP4P12644 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
BMP4P12644 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.49□□□□□ -0.09
BMP4P12644 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.49□□□□□ -0.09
BMP4P12644 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.49□□□□□ -0.09
BMP4P12644 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
BMP4P12644 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.49□□□□□ -0.09
BMP4P12644 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.49□□□□□ -0.09
BMP4P12644 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
BMP4P12644 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
BMP4P12644 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms