Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A1P11836 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.2■□□□□ 0.82
MS4A1P11836 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A1P11836 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A1P11836 SNX18-202ENST00000343017 3140 ntBASIC20.2■□□□□ 0.82
MS4A1P11836 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MS4A1P11836 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
MS4A1P11836 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.19■□□□□ 0.82
MS4A1P11836 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.19■□□□□ 0.82
MS4A1P11836 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 MIR6080-201ENST00000617359 66 ntBASIC20.19■□□□□ 0.82
MS4A1P11836 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
MS4A1P11836 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.19■□□□□ 0.82
MS4A1P11836 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MS4A1P11836 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.19■□□□□ 0.82
MS4A1P11836 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.18■□□□□ 0.82
MS4A1P11836 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.18■□□□□ 0.82
MS4A1P11836 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 SNHG9-202ENST00000564014 471 ntBASIC20.18■□□□□ 0.82
MS4A1P11836 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
MS4A1P11836 MIR4453-201ENST00000584019 89 ntBASIC20.18■□□□□ 0.82
MS4A1P11836 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.18■□□□□ 0.82
MS4A1P11836 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.18■□□□□ 0.82
MS4A1P11836 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MS4A1P11836 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.18■□□□□ 0.82
MS4A1P11836 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.18■□□□□ 0.82
MS4A1P11836 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC20.17■□□□□ 0.82
MS4A1P11836 AC007191.1-201ENST00000623179 2995 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
MS4A1P11836 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MS4A1P11836 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 AC013726.1-201ENST00000563747 2285 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MS4A1P11836 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MS4A1P11836 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
MS4A1P11836 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 HIST3H2BA-201ENST00000436555 524 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 MTND6P24-201ENST00000440466 518 ntBASIC20.17■□□□□ 0.82
MS4A1P11836 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.17■□□□□ 0.82
MS4A1P11836 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.17■□□□□ 0.82
MS4A1P11836 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.17■□□□□ 0.82
MS4A1P11836 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
MS4A1P11836 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms