Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 RNPS1P1-201ENST00000507437 918 ntBASIC17.68■□□□□ 0.42
TPM3P06753 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM3P06753 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM3P06753 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.68■□□□□ 0.42
TPM3P06753 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.68■□□□□ 0.42
TPM3P06753 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TPM3P06753 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TPM3P06753 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TPM3P06753 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 AC006504.5-208ENST00000588784 2401 ntBASIC17.67■□□□□ 0.42
TPM3P06753 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.67■□□□□ 0.42
TPM3P06753 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.67■□□□□ 0.42
TPM3P06753 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 MIR4751-201ENST00000578027 74 ntBASIC17.67■□□□□ 0.42
TPM3P06753 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TPM3P06753 PMS2P7-201ENST00000506558 1336 ntBASIC17.67■□□□□ 0.42
TPM3P06753 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TPM3P06753 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.67■□□□□ 0.42
TPM3P06753 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 AC073439.1-201ENST00000624121 1774 ntBASIC17.66■□□□□ 0.42
TPM3P06753 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
TPM3P06753 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.66■□□□□ 0.42
TPM3P06753 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TPM3P06753 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 AC002347.1-201ENST00000569543 541 ntBASIC17.66■□□□□ 0.42
TPM3P06753 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.66■□□□□ 0.42
TPM3P06753 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.66■□□□□ 0.42
TPM3P06753 AL009183.1-201ENST00000603760 355 ntBASIC17.66■□□□□ 0.42
TPM3P06753 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.66■□□□□ 0.42
TPM3P06753 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.66■□□□□ 0.42
TPM3P06753 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TPM3P06753 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TPM3P06753 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TPM3P06753 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms