Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 TPRKBP1-201ENST00000456243 481 ntBASIC18.45■□□□□ 0.54
MYCNP04198 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.45■□□□□ 0.54
MYCNP04198 SPDYE18-201ENST00000510091 1050 ntBASIC18.45■□□□□ 0.54
MYCNP04198 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.45■□□□□ 0.54
MYCNP04198 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.45■□□□□ 0.54
MYCNP04198 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.45■□□□□ 0.54
MYCNP04198 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.45■□□□□ 0.54
MYCNP04198 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.45■□□□□ 0.54
MYCNP04198 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.45■□□□□ 0.54
MYCNP04198 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.45■□□□□ 0.54
MYCNP04198 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 AC016396.2-201ENST00000562575 1417 ntBASIC18.45■□□□□ 0.54
MYCNP04198 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 AC024341.1-201ENST00000526444 1552 ntBASIC18.45■□□□□ 0.54
MYCNP04198 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC18.45■□□□□ 0.54
MYCNP04198 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
MYCNP04198 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MYCNP04198 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
MYCNP04198 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 MTND4P34-201ENST00000572715 1371 ntBASIC18.44■□□□□ 0.54
MYCNP04198 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 AL354751.1-201ENST00000412768 1863 ntBASIC18.44■□□□□ 0.54
MYCNP04198 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.44■□□□□ 0.54
MYCNP04198 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MYCNP04198 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 TPT1P10-201ENST00000312966 496 ntBASIC18.44■□□□□ 0.54
MYCNP04198 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC18.44■□□□□ 0.54
MYCNP04198 FAM8A4P-201ENST00000435433 1213 ntBASIC18.44■□□□□ 0.54
MYCNP04198 MTND1P34-201ENST00000438556 671 ntBASIC18.44■□□□□ 0.54
MYCNP04198 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.44■□□□□ 0.54
MYCNP04198 MTND5P21-201ENST00000531961 522 ntBASIC18.44■□□□□ 0.54
MYCNP04198 AC078878.1-201ENST00000539832 958 ntBASIC18.44■□□□□ 0.54
MYCNP04198 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.44■□□□□ 0.54
MYCNP04198 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 AL133215.2-201ENST00000609242 977 ntBASIC18.44■□□□□ 0.54
MYCNP04198 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 OR4G3P-201ENST00000633500 913 ntBASIC18.44■□□□□ 0.54
MYCNP04198 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.44■□□□□ 0.54
MYCNP04198 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MYCNP04198 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MYCNP04198 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.44■□□□□ 0.54
MYCNP04198 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
MYCNP04198 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
MYCNP04198 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
MYCNP04198 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 MTND4P5-201ENST00000435821 1374 ntBASIC18.43■□□□□ 0.54
MYCNP04198 AL391825.1-201ENST00000457671 1364 ntBASIC18.43■□□□□ 0.54
MYCNP04198 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.43■□□□□ 0.54
MYCNP04198 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC18.43■□□□□ 0.54
MYCNP04198 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 FCRLA-203ENST00000309691 901 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 AC008549.2-201ENST00000333482 706 ntBASIC18.43■□□□□ 0.54
MYCNP04198 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 ANAPC10P1-201ENST00000395991 556 ntBASIC18.43■□□□□ 0.54
MYCNP04198 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MYCNP04198 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MYCNP04198 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.43■□□□□ 0.54
MYCNP04198 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.43■□□□□ 0.54
MYCNP04198 MTND2P20-201ENST00000440805 661 ntBASIC18.43■□□□□ 0.54
MYCNP04198 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MYCNP04198 AC013439.1-201ENST00000449965 1239 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms