Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 PIN4P1-201ENST00000451079 396 ntBASIC9.5□□□□□ -0.89
APOBP04114 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC9.5□□□□□ -0.89
APOBP04114 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 AC006449.6-201ENST00000612330 2296 ntBASIC9.5□□□□□ -0.89
APOBP04114 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC9.5□□□□□ -0.89
APOBP04114 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 KRT8P21-201ENST00000430398 1491 ntBASIC9.5□□□□□ -0.89
APOBP04114 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 AL132994.2-201ENST00000603120 687 ntBASIC9.5□□□□□ -0.89
APOBP04114 SLC9A7P1-202ENST00000556476 2239 ntBASIC9.5□□□□□ -0.89
APOBP04114 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 AL627231.1-201ENST00000394467 1125 ntBASIC9.5□□□□□ -0.89
APOBP04114 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC9.5□□□□□ -0.89
APOBP04114 AL353637.1-201ENST00000451571 732 ntBASIC9.5□□□□□ -0.89
APOBP04114 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC9.5□□□□□ -0.89
APOBP04114 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 AC138466.4-201ENST00000623965 852 ntBASIC9.5□□□□□ -0.89
APOBP04114 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC9.5□□□□□ -0.89
APOBP04114 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC9.5□□□□□ -0.89
APOBP04114 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
APOBP04114 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
APOBP04114 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC9.49□□□□□ -0.89
APOBP04114 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 AC015909.3-201ENST00000572855 1794 ntBASIC9.49□□□□□ -0.89
APOBP04114 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 CA12-203ENST00000422263 2556 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 AL138725.1-201ENST00000407347 1314 ntBASIC9.49□□□□□ -0.89
APOBP04114 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
APOBP04114 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 HPGD-203ENST00000422112 805 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC9.49□□□□□ -0.89
APOBP04114 AC006122.1-201ENST00000493323 440 ntBASIC9.49□□□□□ -0.89
APOBP04114 AC022616.1-201ENST00000518688 554 ntBASIC9.49□□□□□ -0.89
APOBP04114 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC9.49□□□□□ -0.89
APOBP04114 FO393412.1-201ENST00000619841 382 ntBASIC9.49□□□□□ -0.89
APOBP04114 AC009560.1-201ENST00000620208 434 ntBASIC9.49□□□□□ -0.89
APOBP04114 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
APOBP04114 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 FKBP4P6-201ENST00000457486 1332 ntBASIC9.49□□□□□ -0.89
APOBP04114 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
APOBP04114 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC9.49□□□□□ -0.89
APOBP04114 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC9.49□□□□□ -0.89
APOBP04114 IRF3-215ENST00000596822 823 ntTSL 3 BASIC9.49□□□□□ -0.89
APOBP04114 AC012073.1-201ENST00000606114 1108 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms