Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
NKX2-2O95096 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
NKX2-2O95096 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NKX2-2O95096 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
NKX2-2O95096 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 AL512638.1-201ENST00000457493 794 ntBASIC14.46□□□□□ -0.09
NKX2-2O95096 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.46□□□□□ -0.09
NKX2-2O95096 CYMP-203ENST00000474680 1263 ntBASIC14.46□□□□□ -0.09
NKX2-2O95096 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 AC093214.1-201ENST00000511688 1107 ntBASIC14.46□□□□□ -0.09
NKX2-2O95096 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.46□□□□□ -0.09
NKX2-2O95096 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.46□□□□□ -0.09
NKX2-2O95096 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
NKX2-2O95096 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NKX2-2O95096 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-2O95096 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.46□□□□□ -0.1
NKX2-2O95096 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-2O95096 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-2O95096 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NKX2-2O95096 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.46□□□□□ -0.1
NKX2-2O95096 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NKX2-2O95096 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 AC148477.4-201ENST00000613430 1793 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX2-2O95096 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.45□□□□□ -0.1
NKX2-2O95096 MRPS18AP1-201ENST00000414458 589 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 FAM8A3P-201ENST00000427218 844 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-2O95096 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 AC135586.1-201ENST00000539323 574 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-2O95096 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NKX2-2O95096 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.45□□□□□ -0.1
NKX2-2O95096 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX2-2O95096 SRD5A3P1-201ENST00000603021 949 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 AC000095.1-201ENST00000603208 874 ntBASIC14.45□□□□□ -0.1
NKX2-2O95096 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NKX2-2O95096 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.45□□□□□ -0.1
NKX2-2O95096 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NKX2-2O95096 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NKX2-2O95096 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms