Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CLPXO76031 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.37□□□□□ -0.11
CLPXO76031 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.37□□□□□ -0.11
CLPXO76031 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLPXO76031 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
CLPXO76031 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLPXO76031 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.37□□□□□ -0.11
CLPXO76031 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 AC092135.3-201ENST00000624151 1846 ntBASIC14.36□□□□□ -0.11
CLPXO76031 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.36□□□□□ -0.11
CLPXO76031 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 ABCD1P5-201ENST00000445663 754 ntBASIC14.36□□□□□ -0.11
CLPXO76031 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.36□□□□□ -0.11
CLPXO76031 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.36□□□□□ -0.11
CLPXO76031 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.36□□□□□ -0.11
CLPXO76031 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 AC006538.3-201ENST00000612495 578 ntBASIC14.36□□□□□ -0.11
CLPXO76031 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.36□□□□□ -0.11
CLPXO76031 BX640515.1-201ENST00000617215 977 ntBASIC14.36□□□□□ -0.11
CLPXO76031 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLPXO76031 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 HLA-A-201ENST00000376802 1334 ntBASIC14.36□□□□□ -0.11
CLPXO76031 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLPXO76031 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.36□□□□□ -0.11
CLPXO76031 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.36□□□□□ -0.11
CLPXO76031 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 ZBED1P1-201ENST00000502364 1930 ntBASIC14.35□□□□□ -0.11
CLPXO76031 AC011477.6-201ENST00000604980 1927 ntBASIC14.35□□□□□ -0.11
CLPXO76031 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLPXO76031 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLPXO76031 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.35□□□□□ -0.11
CLPXO76031 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.35□□□□□ -0.11
CLPXO76031 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.35□□□□□ -0.11
CLPXO76031 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms