Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 TCAF2P1-201ENST00000291129 2421 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.32■□□□□ 0.2
LRCH4O75427 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH4O75427 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH4O75427 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 SDHAP3-202ENST00000515467 728 ntBASIC16.32■□□□□ 0.2
LRCH4O75427 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH4O75427 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH4O75427 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.32■□□□□ 0.2
LRCH4O75427 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRCH4O75427 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCH4O75427 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.32■□□□□ 0.2
LRCH4O75427 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
LRCH4O75427 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.31■□□□□ 0.2
LRCH4O75427 RPL5P21-201ENST00000404620 815 ntBASIC16.31■□□□□ 0.2
LRCH4O75427 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.31■□□□□ 0.2
LRCH4O75427 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.31■□□□□ 0.2
LRCH4O75427 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
LRCH4O75427 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.31■□□□□ 0.2
LRCH4O75427 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.31■□□□□ 0.2
LRCH4O75427 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRCH4O75427 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LRCH4O75427 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRCH4O75427 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LRCH4O75427 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRCH4O75427 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH4O75427 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.3■□□□□ 0.2
LRCH4O75427 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRCH4O75427 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRCH4O75427 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms