Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.48■□□□□ 0.23
OPHN1O60890 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.48■□□□□ 0.23
OPHN1O60890 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.48■□□□□ 0.23
OPHN1O60890 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.48■□□□□ 0.23
OPHN1O60890 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
OPHN1O60890 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.48■□□□□ 0.23
OPHN1O60890 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.48■□□□□ 0.23
OPHN1O60890 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.48■□□□□ 0.23
OPHN1O60890 AL590560.3-201ENST00000623350 461 ntBASIC16.48■□□□□ 0.23
OPHN1O60890 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.48■□□□□ 0.23
OPHN1O60890 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
OPHN1O60890 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
OPHN1O60890 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.48■□□□□ 0.23
OPHN1O60890 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.48■□□□□ 0.23
OPHN1O60890 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.48■□□□□ 0.23
OPHN1O60890 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPHN1O60890 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
OPHN1O60890 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
OPHN1O60890 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.47■□□□□ 0.23
OPHN1O60890 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
OPHN1O60890 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 MRPS18AP1-201ENST00000414458 589 ntBASIC16.47■□□□□ 0.23
OPHN1O60890 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
OPHN1O60890 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.47■□□□□ 0.23
OPHN1O60890 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
OPHN1O60890 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
OPHN1O60890 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
OPHN1O60890 AC022144.1-201ENST00000602255 1580 ntBASIC16.47■□□□□ 0.23
OPHN1O60890 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.47■□□□□ 0.23
OPHN1O60890 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
OPHN1O60890 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.46■□□□□ 0.23
OPHN1O60890 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
OPHN1O60890 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 AC134407.2-201ENST00000625089 1978 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
OPHN1O60890 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 AC092384.3-202ENST00000564646 2873 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
OPHN1O60890 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
OPHN1O60890 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.46■□□□□ 0.23
OPHN1O60890 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 FAM220BP-201ENST00000377689 816 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.46■□□□□ 0.23
OPHN1O60890 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.46■□□□□ 0.23
OPHN1O60890 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.46■□□□□ 0.23
OPHN1O60890 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.46■□□□□ 0.23
OPHN1O60890 AC243562.2-201ENST00000561247 970 ntBASIC16.46■□□□□ 0.23
OPHN1O60890 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.46■□□□□ 0.23
OPHN1O60890 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.46■□□□□ 0.23
OPHN1O60890 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms