Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL137013.1-201ENST00000432946 1228 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.23□□□□□ -0.45
PDE6DO43924 KRT17P6-201ENST00000453795 1220 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 AP002469.2-201ENST00000531724 424 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
PDE6DO43924 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.23□□□□□ -0.45
PDE6DO43924 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.23□□□□□ -0.45
PDE6DO43924 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 AP006294.2-201ENST00000641667 209 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 PEG13-201ENST00000631594 5667 ntBASIC12.22□□□□□ -0.45
PDE6DO43924 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.22□□□□□ -0.45
PDE6DO43924 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.22□□□□□ -0.45
PDE6DO43924 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.22□□□□□ -0.45
PDE6DO43924 BX276092.5-203ENST00000456199 560 ntBASIC12.22□□□□□ -0.45
PDE6DO43924 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 AC139887.3-201ENST00000568585 713 ntBASIC12.22□□□□□ -0.45
PDE6DO43924 MIR3909-201ENST00000579518 119 ntBASIC12.22□□□□□ -0.45
PDE6DO43924 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.22□□□□□ -0.45
PDE6DO43924 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.22□□□□□ -0.45
PDE6DO43924 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.22□□□□□ -0.45
PDE6DO43924 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PDE6DO43924 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.21□□□□□ -0.45
PDE6DO43924 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
PDE6DO43924 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
PDE6DO43924 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.21□□□□□ -0.45
PDE6DO43924 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PDE6DO43924 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.21□□□□□ -0.45
PDE6DO43924 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms