Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.37□□□□□ -0.11
RNF13O43567 YBX1P5-201ENST00000509441 847 ntBASIC14.37□□□□□ -0.11
RNF13O43567 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 AC084121.4-201ENST00000641598 221 ntBASIC14.37□□□□□ -0.11
RNF13O43567 AF228730.8-201ENST00000642140 221 ntBASIC14.37□□□□□ -0.11
RNF13O43567 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF13O43567 AL136982.4-201ENST00000437689 1740 ntBASIC14.37□□□□□ -0.11
RNF13O43567 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RNF13O43567 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 TCAF2P1-201ENST00000291129 2421 ntBASIC14.36□□□□□ -0.11
RNF13O43567 REXO1L1P-202ENST00000608646 1974 ntBASIC14.36□□□□□ -0.11
RNF13O43567 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 AC018892.3-201ENST00000623986 2499 ntBASIC14.36□□□□□ -0.11
RNF13O43567 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF13O43567 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF13O43567 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
RNF13O43567 RPS8P6-201ENST00000426177 609 ntBASIC14.36□□□□□ -0.11
RNF13O43567 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF13O43567 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 AC112482.1-201ENST00000492080 688 ntBASIC14.36□□□□□ -0.11
RNF13O43567 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF13O43567 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF13O43567 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF13O43567 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF13O43567 AL513210.1-201ENST00000629608 234 ntBASIC14.36□□□□□ -0.11
RNF13O43567 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF13O43567 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF13O43567 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF13O43567 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF13O43567 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 CYP4F24P-201ENST00000586049 1580 ntBASIC14.35□□□□□ -0.11
RNF13O43567 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF13O43567 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF13O43567 AC004461.1-201ENST00000412461 403 ntBASIC14.35□□□□□ -0.11
RNF13O43567 AL627223.1-201ENST00000416693 442 ntBASIC14.35□□□□□ -0.11
RNF13O43567 UPF3AP3-201ENST00000420996 769 ntBASIC14.35□□□□□ -0.11
RNF13O43567 AL353705.2-201ENST00000428243 662 ntBASIC14.35□□□□□ -0.11
RNF13O43567 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF13O43567 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms