Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.28■□□□□ 0.2
MSI1O43347 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MSI1O43347 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.28■□□□□ 0.2
MSI1O43347 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.28■□□□□ 0.2
MSI1O43347 AC005225.4-201ENST00000557330 545 ntBASIC16.28■□□□□ 0.2
MSI1O43347 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.28■□□□□ 0.2
MSI1O43347 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.28■□□□□ 0.2
MSI1O43347 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MSI1O43347 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MSI1O43347 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.27■□□□□ 0.2
MSI1O43347 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MSI1O43347 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
MSI1O43347 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.27■□□□□ 0.2
MSI1O43347 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 AC104596.2-201ENST00000512793 793 ntBASIC16.27■□□□□ 0.2
MSI1O43347 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.27■□□□□ 0.2
MSI1O43347 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.27■□□□□ 0.2
MSI1O43347 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MSI1O43347 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.27■□□□□ 0.2
MSI1O43347 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MSI1O43347 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.27■□□□□ 0.19
MSI1O43347 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.27■□□□□ 0.19
MSI1O43347 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.27■□□□□ 0.19
MSI1O43347 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MSI1O43347 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
MSI1O43347 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.26■□□□□ 0.19
MSI1O43347 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MSI1O43347 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.26■□□□□ 0.19
MSI1O43347 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.26■□□□□ 0.19
MSI1O43347 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.26■□□□□ 0.19
MSI1O43347 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MSI1O43347 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.26■□□□□ 0.19
MSI1O43347 AC015910.1-201ENST00000579400 975 ntBASIC16.26■□□□□ 0.19
MSI1O43347 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.26■□□□□ 0.19
MSI1O43347 WFDC1-204ENST00000613603 549 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms