Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC16.45■□□□□ 0.22
TNRC18O15417 AC027612.2-202ENST00000445955 1199 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 RPL35P9-201ENST00000446059 350 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 AC078814.4-201ENST00000546650 327 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 AC138701.2-201ENST00000553634 226 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.44■□□□□ 0.22
TNRC18O15417 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 FKBP4P6-201ENST00000457486 1332 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 CROCCP2-202ENST00000412962 2773 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.44■□□□□ 0.22
TNRC18O15417 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 KRT8P6-201ENST00000399259 1207 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.44■□□□□ 0.22
TNRC18O15417 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC16.44■□□□□ 0.22
TNRC18O15417 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.44■□□□□ 0.22
TNRC18O15417 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 GEMIN8P4-201ENST00000380526 729 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 AL121949.1-201ENST00000402043 968 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 AC098934.1-203ENST00000442868 1262 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TNRC18O15417 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.44■□□□□ 0.22
TNRC18O15417 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNRC18O15417 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.43■□□□□ 0.22
TNRC18O15417 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.43■□□□□ 0.22
TNRC18O15417 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 AC055811.4-201ENST00000624039 1754 ntBASIC16.43■□□□□ 0.22
TNRC18O15417 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 AC144522.1-201ENST00000625111 1658 ntBASIC16.43■□□□□ 0.22
TNRC18O15417 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TNRC18O15417 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC16.43■□□□□ 0.22
TNRC18O15417 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.43■□□□□ 0.22
TNRC18O15417 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TNRC18O15417 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC16.43■□□□□ 0.22
TNRC18O15417 AC005865.2-202ENST00000635814 725 ntBASIC16.43■□□□□ 0.22
TNRC18O15417 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC16.43■□□□□ 0.22
TNRC18O15417 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.43■□□□□ 0.22
TNRC18O15417 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TNRC18O15417 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TNRC18O15417 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNRC18O15417 GGT3P-204ENST00000453783 1664 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms