Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA5O15230 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.21□□□□□ -0.13
LAMA5O15230 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LAMA5O15230 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.21□□□□□ -0.14
LAMA5O15230 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 ALG1L6P-201ENST00000515248 758 ntBASIC14.21□□□□□ -0.14
LAMA5O15230 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 AC027237.1-201ENST00000560942 655 ntBASIC14.21□□□□□ -0.14
LAMA5O15230 AL023803.2-201ENST00000620080 638 ntBASIC14.21□□□□□ -0.14
LAMA5O15230 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.21□□□□□ -0.14
LAMA5O15230 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.21□□□□□ -0.14
LAMA5O15230 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 REXO1L5P-201ENST00000622260 2098 ntBASIC14.21□□□□□ -0.14
LAMA5O15230 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LAMA5O15230 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LAMA5O15230 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
LAMA5O15230 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 ISCA2P1-201ENST00000425548 448 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA5O15230 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 AL031713.1-201ENST00000564813 661 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.2□□□□□ -0.14
LAMA5O15230 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
LAMA5O15230 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA5O15230 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LAMA5O15230 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 AL357563.1-201ENST00000404728 395 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 AC130709.1-201ENST00000484779 1212 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 RCC2P8-201ENST00000502779 1035 ntBASIC14.2□□□□□ -0.14
LAMA5O15230 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.2□□□□□ -0.14
LAMA5O15230 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.2□□□□□ -0.14
LAMA5O15230 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LAMA5O15230 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LAMA5O15230 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.19□□□□□ -0.14
LAMA5O15230 RBM8B-201ENST00000555532 525 ntBASIC14.19□□□□□ -0.14
LAMA5O15230 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LAMA5O15230 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.19□□□□□ -0.14
LAMA5O15230 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA5O15230 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.19□□□□□ -0.14
LAMA5O15230 AL157791.1-201ENST00000553667 1699 ntBASIC14.19□□□□□ -0.14
LAMA5O15230 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.19□□□□□ -0.14
LAMA5O15230 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.19□□□□□ -0.14
LAMA5O15230 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LAMA5O15230 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LAMA5O15230 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms