Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.2■□□□□ 0.98
CHD2O14647 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD2O14647 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHD2O14647 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
CHD2O14647 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHD2O14647 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD2O14647 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD2O14647 PIN4P1-201ENST00000451079 396 ntBASIC21.2■□□□□ 0.98
CHD2O14647 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD2O14647 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD2O14647 RN7SL258P-201ENST00000478664 300 ntBASIC21.2■□□□□ 0.98
CHD2O14647 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHD2O14647 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHD2O14647 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD2O14647 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.2■□□□□ 0.98
CHD2O14647 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CHD2O14647 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD2O14647 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD2O14647 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 FLJ38576-201ENST00000623820 2459 ntBASIC21.19■□□□□ 0.98
CHD2O14647 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CHD2O14647 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD2O14647 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHD2O14647 AC078875.1-201ENST00000431907 724 ntBASIC21.19■□□□□ 0.98
CHD2O14647 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC21.19■□□□□ 0.98
CHD2O14647 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD2O14647 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD2O14647 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD2O14647 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD2O14647 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 AP000356.3-201ENST00000382243 753 ntBASIC21.18■□□□□ 0.98
CHD2O14647 AL139008.1-201ENST00000437894 228 ntBASIC21.18■□□□□ 0.98
CHD2O14647 PUDPP3-201ENST00000445368 636 ntBASIC21.18■□□□□ 0.98
CHD2O14647 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC21.18■□□□□ 0.98
CHD2O14647 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.18■□□□□ 0.98
CHD2O14647 AC008805.1-201ENST00000590892 364 ntBASIC21.18■□□□□ 0.98
CHD2O14647 AC005632.3-201ENST00000605544 308 ntBASIC21.18■□□□□ 0.98
CHD2O14647 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CHD2O14647 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 MIR1227-201ENST00000408484 88 ntBASIC21.18■□□□□ 0.98
CHD2O14647 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD2O14647 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC21.18■□□□□ 0.98
CHD2O14647 RPL18AP3-201ENST00000462885 528 ntBASIC21.18■□□□□ 0.98
CHD2O14647 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC21.18■□□□□ 0.98
CHD2O14647 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD2O14647 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.18■□□□□ 0.98
CHD2O14647 AL109837.1-201ENST00000603272 613 ntBASIC21.18■□□□□ 0.98
CHD2O14647 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CHD2O14647 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD2O14647 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD2O14647 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD2O14647 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD2O14647 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms