Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC084364.1-201ENST00000551967 1556 ntBASIC16.81■□□□□ 0.28
FOXN3O00409 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXN3O00409 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXN3O00409 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXN3O00409 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC148477.4-201ENST00000613430 1793 ntBASIC16.8■□□□□ 0.28
FOXN3O00409 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FOXN3O00409 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC107890.1-201ENST00000422478 521 ntBASIC16.8■□□□□ 0.28
FOXN3O00409 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC097493.3-201ENST00000509725 367 ntBASIC16.8■□□□□ 0.28
FOXN3O00409 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 LINC01115-203ENST00000606068 577 ntBASIC16.8■□□□□ 0.28
FOXN3O00409 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXN3O00409 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXN3O00409 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXN3O00409 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXN3O00409 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.79■□□□□ 0.28
FOXN3O00409 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXN3O00409 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FOXN3O00409 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.79■□□□□ 0.28
FOXN3O00409 RPL13P2-201ENST00000440687 659 ntBASIC16.79■□□□□ 0.28
FOXN3O00409 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXN3O00409 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXN3O00409 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FOXN3O00409 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.79■□□□□ 0.28
FOXN3O00409 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.79■□□□□ 0.28
FOXN3O00409 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FOXN3O00409 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
FOXN3O00409 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.78■□□□□ 0.28
FOXN3O00409 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.78■□□□□ 0.28
FOXN3O00409 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.78■□□□□ 0.28
FOXN3O00409 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FOXN3O00409 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms