Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 KLF2P4-201ENST00000451959 1225 ntBASIC15.56■□□□□ 0.08
TLR4O00206 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.56■□□□□ 0.08
TLR4O00206 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.56■□□□□ 0.08
TLR4O00206 PTP4A1P2-201ENST00000546033 454 ntBASIC15.56■□□□□ 0.08
TLR4O00206 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.56■□□□□ 0.08
TLR4O00206 AL049840.4-201ENST00000602422 811 ntBASIC15.56■□□□□ 0.08
TLR4O00206 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.56■□□□□ 0.08
TLR4O00206 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 PDIA3P1-201ENST00000471856 1510 ntBASIC15.56■□□□□ 0.08
TLR4O00206 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.56■□□□□ 0.08
TLR4O00206 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.56■□□□□ 0.08
TLR4O00206 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TLR4O00206 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TLR4O00206 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.55■□□□□ 0.08
TLR4O00206 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 BCRP2-202ENST00000447763 634 ntBASIC15.55■□□□□ 0.08
TLR4O00206 BNIP3P42-201ENST00000454982 569 ntBASIC15.55■□□□□ 0.08
TLR4O00206 CTBP2P5-201ENST00000454986 1264 ntBASIC15.55■□□□□ 0.08
TLR4O00206 BCRP6-201ENST00000510112 632 ntBASIC15.55■□□□□ 0.08
TLR4O00206 BCRP7-201ENST00000511549 544 ntBASIC15.55■□□□□ 0.08
TLR4O00206 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.55■□□□□ 0.08
TLR4O00206 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.55■□□□□ 0.08
TLR4O00206 AC124283.3-201ENST00000570869 594 ntBASIC15.55■□□□□ 0.08
TLR4O00206 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.55■□□□□ 0.08
TLR4O00206 BNIP3P29-201ENST00000598302 571 ntBASIC15.55■□□□□ 0.08
TLR4O00206 AC011447.5-201ENST00000616168 564 ntBASIC15.55■□□□□ 0.08
TLR4O00206 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.55■□□□□ 0.08
TLR4O00206 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.55■□□□□ 0.08
TLR4O00206 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TLR4O00206 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TLR4O00206 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
TLR4O00206 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TLR4O00206 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.54■□□□□ 0.08
TLR4O00206 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 REXO1L6P-201ENST00000603433 1515 ntBASIC15.54■□□□□ 0.08
TLR4O00206 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.54■□□□□ 0.08
TLR4O00206 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TLR4O00206 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TLR4O00206 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms