Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AL513523.2-202ENST00000427283 2040 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 C2orf27AP3-201ENST00000434123 579 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 KRT90P-201ENST00000549264 1064 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AC015910.1-201ENST00000579400 975 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 MIR4313-201ENST00000580760 101 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 AL354718.3-201ENST00000616414 581 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 MIR6787-201ENST00000616675 61 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 GPR182-203ENST00000622922 591 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 CR382287.1-201ENST00000623954 586 ntBASIC18.12■□□□□ 0.49
USP17L11C9JVI0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
USP17L11C9JVI0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AC026954.1-201ENST00000429771 1293 ntBASIC18.11■□□□□ 0.49
USP17L11C9JVI0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AP001582.1-201ENST00000525856 295 ntBASIC18.11■□□□□ 0.49
USP17L11C9JVI0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 GNRHR2-203ENST00000581100 1187 ntBASIC18.11■□□□□ 0.49
USP17L11C9JVI0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AC010328.2-201ENST00000597698 1111 ntBASIC18.11■□□□□ 0.49
USP17L11C9JVI0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP17L11C9JVI0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 AL133338.1-201ENST00000565695 1517 ntBASIC18.1■□□□□ 0.49
USP17L11C9JVI0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 KRT8P44-201ENST00000441609 1350 ntBASIC18.1■□□□□ 0.49
USP17L11C9JVI0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
USP17L11C9JVI0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms