Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF103-CHMP3A0A140T963 CICP23-201ENST00000605013 2741 ntBASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC138969.2-201ENST00000532739 9932 ntBASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC002056.1-201ENST00000395613 760 ntBASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 RNA5SP416-201ENST00000516838 111 ntBASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC112191.1-201ENST00000523689 701 ntBASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF103-CHMP3A0A140T963 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 MED15P5-201ENST00000423150 992 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SLC25A1P1-201ENST00000528351 927 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 AP002472.1-201ENST00000577490 586 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 MIR4321-201ENST00000592276 80 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 AC120114.3-201ENST00000611923 658 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 CICP4-201ENST00000447359 2812 ntBASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF103-CHMP3A0A140T963 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms