Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AC134407.2-201ENST00000625089 1978 ntBASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.92□□□□□ -0.5
HLA-DRB4X5D2U9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AC005089.1-201ENST00000619486 2241 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SPDYE7P-202ENST00000420373 878 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 DNAJB3-202ENST00000449667 1266 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AC026150.2-201ENST00000564693 1156 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AL596442.2-201ENST00000610240 980 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 AP001059.3-201ENST00000619053 235 ntBASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
HLA-DRB4X5D2U9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.9□□□□□ -0.5
HLA-DRB4X5D2U9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms