Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 AC098935.1-201ENST00000446057 611 ntBASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 NPM1P43-201ENST00000558669 786 ntBASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 KRT8P4-201ENST00000509735 1454 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC106886.4-201ENST00000623557 2502 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AL354877.1-201ENST00000424412 413 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 HIST2H2BB-201ENST00000449108 381 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC021723.1-201ENST00000486306 515 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC013355.1-201ENST00000562625 723 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC135983.4-201ENST00000564116 1262 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 RN7SL713P-201ENST00000582127 302 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AC073413.1-201ENST00000603927 732 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 COX6A1P2-201ENST00000620597 330 ntBASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PTCH2Q9Y6C5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 AC020916.1-201ENST00000587762 1774 ntBASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 RN7SL181P-201ENST00000462921 277 ntBASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 OR10B1P-201ENST00000601666 907 ntBASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 AL353770.1-201ENST00000614915 403 ntBASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.49■□□□□ 0.39
PTCH2Q9Y6C5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms