Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 AC092865.5-201ENST00000545435 363 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 AC087641.1-201ENST00000557561 1021 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 MIR3687-2-201ENST00000577708 61 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 MIR3687-1-201ENST00000614492 61 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 AC023511.2-201ENST00000618803 211 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 MROH4P-201ENST00000431302 1578 ntBASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP4B1Q9Y6B7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 KRT18P13-201ENST00000400056 1290 ntBASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
AP4B1Q9Y6B7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 AC131009.4-201ENST00000624048 1740 ntBASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 AC068137.2-201ENST00000605408 478 ntBASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
AP4B1Q9Y6B7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms