Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.28■□□□□ 0.2
YIPF1Q9Y548 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 MIR1908-201ENST00000410394 80 ntBASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 YBX1P6-201ENST00000442962 1002 ntBASIC16.28■□□□□ 0.2
YIPF1Q9Y548 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 MIR4538-201ENST00000581377 78 ntBASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
YIPF1Q9Y548 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RNU1-114P-201ENST00000365297 166 ntBASIC16.27■□□□□ 0.2
YIPF1Q9Y548 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 CNN2P8-201ENST00000421872 913 ntBASIC16.27■□□□□ 0.2
YIPF1Q9Y548 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 RN7SL219P-201ENST00000582872 296 ntBASIC16.27■□□□□ 0.2
YIPF1Q9Y548 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 AC145423.3-201ENST00000615987 467 ntBASIC16.27■□□□□ 0.2
YIPF1Q9Y548 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
YIPF1Q9Y548 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.27■□□□□ 0.19
YIPF1Q9Y548 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
YIPF1Q9Y548 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
YIPF1Q9Y548 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms