Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC005229.1-201ENST00000392885 409 ntBASIC16.03■□□□□ 0.16
EBF1Q9UH73 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 FO681548.1-201ENST00000455617 1132 ntBASIC16.03■□□□□ 0.16
EBF1Q9UH73 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 MIR6787-201ENST00000616675 61 ntBASIC16.03■□□□□ 0.16
EBF1Q9UH73 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.03■□□□□ 0.16
EBF1Q9UH73 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EBF1Q9UH73 AL365203.3-201ENST00000609742 2057 ntBASIC16.03■□□□□ 0.16
EBF1Q9UH73 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 AL355994.2-201ENST00000447882 704 ntBASIC16.02■□□□□ 0.16
EBF1Q9UH73 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 TDH-203ENST00000531764 1110 ntBASIC16.02■□□□□ 0.16
EBF1Q9UH73 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 RN7SL219P-201ENST00000582872 296 ntBASIC16.02■□□□□ 0.16
EBF1Q9UH73 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
EBF1Q9UH73 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EBF1Q9UH73 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 AL592424.1-201ENST00000563624 1536 ntBASIC16.02■□□□□ 0.15
EBF1Q9UH73 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.02■□□□□ 0.15
EBF1Q9UH73 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EBF1Q9UH73 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms