Protein–RNA interactions for Protein: Q9P109

GCNT4, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT4Q9P109 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 HIST3H2BA-201ENST00000436555 524 ntBASIC17.13■□□□□ 0.33
GCNT4Q9P109 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.13■□□□□ 0.33
GCNT4Q9P109 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCNT4Q9P109 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 TSPY16P-201ENST00000449843 468 ntBASIC17.12■□□□□ 0.33
GCNT4Q9P109 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 RN7SL204P-201ENST00000582831 262 ntBASIC17.12■□□□□ 0.33
GCNT4Q9P109 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AC073592.8-201ENST00000624126 511 ntBASIC17.12■□□□□ 0.33
GCNT4Q9P109 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 KRT8P12-202ENST00000472924 1397 ntBASIC17.12■□□□□ 0.33
GCNT4Q9P109 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCNT4Q9P109 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.12■□□□□ 0.33
GCNT4Q9P109 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCNT4Q9P109 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 FO393414.2-201ENST00000405153 598 ntBASIC17.11■□□□□ 0.33
GCNT4Q9P109 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 TSSK5P-201ENST00000423978 907 ntBASIC17.11■□□□□ 0.33
GCNT4Q9P109 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 COX20P2-201ENST00000452636 358 ntBASIC17.11■□□□□ 0.33
GCNT4Q9P109 AC004890.2-204ENST00000481968 304 ntBASIC17.11■□□□□ 0.33
GCNT4Q9P109 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.11■□□□□ 0.33
GCNT4Q9P109 AL079307.3-201ENST00000556114 283 ntBASIC17.11■□□□□ 0.33
GCNT4Q9P109 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms