Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 SLC9A7P1-202ENST00000556476 2239 ntBASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 YBX1P10-201ENST00000444752 975 ntBASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 AL117332.1-201ENST00000622628 974 ntBASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 NTM-206ENST00000427481 2583 ntTSL 5 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 C2-209ENST00000452323 1999 ntTSL 2 BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 FLJ30679-201ENST00000624773 1980 ntBASIC7.9□□□□□ -1.15
CDC42SE1Q9NRR8 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LINC00895-201ENST00000629028 1637 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 BX276092.7-203ENST00000637198 1536 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AL354861.3-201ENST00000600140 2412 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 HERC2P9-206ENST00000529624 5187 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 AL162393.1-201ENST00000437852 946 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MFSD11-216ENST00000590393 1141 ntBASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CDC42SE1Q9NRR8 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms