Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 LINC02228-204ENST00000642115 2962 ntBASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 RPL37AP1-201ENST00000412502 279 ntBASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 TCAF2P1-201ENST00000291129 2421 ntBASIC15.83■□□□□ 0.12
CHRAC1Q9NRG0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 AL136379.1-201ENST00000623471 2642 ntBASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 AL080243.2-201ENST00000418783 582 ntBASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHRAC1Q9NRG0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 MIR1233-2-201ENST00000408138 82 ntBASIC15.81■□□□□ 0.12
CHRAC1Q9NRG0 MIR1233-1-201ENST00000408722 82 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms