Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SCAF1Q9H7N4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 MTND2P40-201ENST00000436718 841 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AC103810.3-201ENST00000583567 96 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 MIR4515-201ENST00000584082 81 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AC004840.1-201ENST00000636359 365 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 AC020907.1-201ENST00000616460 1350 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 PPT1-215ENST00000641471 2368 ntBASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC23.71■■□□□ 1.39
SCAF1Q9H7N4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC23.7■■□□□ 1.39
SCAF1Q9H7N4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SCAF1Q9H7N4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SCAF1Q9H7N4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
SCAF1Q9H7N4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 MYCLP1-201ENST00000372451 1075 ntBASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 OR6D1P-202ENST00000641007 5290 ntBASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC23.7■■□□□ 1.38
SCAF1Q9H7N4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AC135586.1-201ENST00000539323 574 ntBASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AL009183.1-201ENST00000603760 355 ntBASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 AC018529.1-201ENST00000613063 361 ntBASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCAF1Q9H7N4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms