Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 KLF2P4-201ENST00000451959 1225 ntBASIC18.26■□□□□ 0.51
SH2D4AQ9H788 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 AC119751.2-201ENST00000504529 210 ntBASIC18.26■□□□□ 0.51
SH2D4AQ9H788 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 CLUHP6-201ENST00000580789 941 ntBASIC18.26■□□□□ 0.51
SH2D4AQ9H788 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 AC069224.1-201ENST00000566372 1715 ntBASIC18.26■□□□□ 0.51
SH2D4AQ9H788 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SH2D4AQ9H788 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 BAATP1-201ENST00000412284 1225 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 BCRP2-202ENST00000447763 634 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 BCRP6-201ENST00000510112 632 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 BCRP7-201ENST00000511549 544 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AP001889.1-201ENST00000525414 633 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 SNX29P1-201ENST00000548357 1007 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AC005252.2-201ENST00000624630 1141 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AC022188.1-201ENST00000620960 1664 ntBASIC18.25■□□□□ 0.51
SH2D4AQ9H788 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SH2D4AQ9H788 DRD5P1-201ENST00000456605 1438 ntBASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.24■□□□□ 0.51
SH2D4AQ9H788 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms