Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 EIF4HP1-201ENST00000453115 687 ntBASIC17.07■□□□□ 0.32
HIPK3Q9H422 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.07■□□□□ 0.32
HIPK3Q9H422 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HIPK3Q9H422 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 AC018735.1-201ENST00000437208 1502 ntBASIC17.06■□□□□ 0.32
HIPK3Q9H422 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 NUS1P3-201ENST00000423502 862 ntBASIC17.06■□□□□ 0.32
HIPK3Q9H422 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HIPK3Q9H422 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HIPK3Q9H422 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 ACTBP8-201ENST00000403258 1108 ntBASIC17.05■□□□□ 0.32
HIPK3Q9H422 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CICP6-201ENST00000457191 2729 ntBASIC17.05■□□□□ 0.32
HIPK3Q9H422 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.05■□□□□ 0.32
HIPK3Q9H422 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ME2P1-201ENST00000426028 1970 ntBASIC17.04■□□□□ 0.32
HIPK3Q9H422 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIPK3Q9H422 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
HIPK3Q9H422 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms