Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 REXO1L1P-202ENST00000608646 1974 ntBASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 FAM58DP-201ENST00000428076 619 ntBASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC243562.1-201ENST00000560672 389 ntBASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC061975.2-201ENST00000581722 295 ntBASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
FOXP3Q9BZS1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AC093214.1-201ENST00000511688 1107 ntBASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 RARRES2P8-201ENST00000566335 367 ntBASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AL390955.2-201ENST00000603032 514 ntBASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FOXP3Q9BZS1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 CICP23-201ENST00000605013 2741 ntBASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.27■□□□□ 0.19
FOXP3Q9BZS1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC069335.1-201ENST00000489972 472 ntBASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.26■□□□□ 0.19
FOXP3Q9BZS1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms