Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC097359.3-201ENST00000603982 1210 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC138466.3-201ENST00000619983 221 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC020904.3-201ENST00000624199 442 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 AC092053.1-201ENST00000605787 1936 ntBASIC15.47■□□□□ 0.07
COL25A1Q9BXS0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 SHC1P1-201ENST00000425230 1745 ntBASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 BANF1P3-201ENST00000412556 261 ntBASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 RPSAP15-201ENST00000448168 861 ntBASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 AC124947.2-201ENST00000547118 1133 ntBASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COL25A1Q9BXS0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL25A1Q9BXS0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
COL25A1Q9BXS0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AL008718.2-201ENST00000609206 1313 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 KRT8P14-201ENST00000414254 1442 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AC092068.3-201ENST00000587894 2016 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AL512306.1-201ENST00000432698 848 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AC012441.2-201ENST00000444843 739 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 KLF2P1-201ENST00000447438 1042 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 RN7SL173P-201ENST00000461853 292 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AC120057.1-201ENST00000483947 663 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 EEF1DP7-201ENST00000580496 513 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AC021321.1-201ENST00000607397 1113 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AC006986.1-201ENST00000612764 241 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 PCGF3-213ENST00000620529 1899 ntBASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.45■□□□□ 0.06
COL25A1Q9BXS0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 CLUHP2-201ENST00000426660 1303 ntBASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL25A1Q9BXS0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms