Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AC097359.3-201ENST00000603982 1210 ntBASIC19■□□□□ 0.63
RPAP1Q9BWH6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19■□□□□ 0.63
RPAP1Q9BWH6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RPAP1Q9BWH6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPAP1Q9BWH6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 CICP13-201ENST00000422015 2789 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AC136621.1-201ENST00000624017 2304 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 KRT223P-202ENST00000449164 1292 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 COX11-210ENST00000639671 696 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 AL033527.4-201ENST00000641026 673 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 SSR4P1-203ENST00000599569 2260 ntBASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.99■□□□□ 0.63
RPAP1Q9BWH6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPAP1Q9BWH6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 ANKRD19P-201ENST00000338192 862 ntBASIC18.97■□□□□ 0.63
RPAP1Q9BWH6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms